Package: tidypq
Title: Tidyverse-Style Verbs for 'phyloseq' Objects
Version: 0.1.1
Authors@R: 
    person("Adrien", "Taudière", , "adrien.taudiere@zaclys.net", role = c("aut", "cre", "cph"),
           comment = c(ORCID = "0000-0003-1088-1182"))
Description: Tidyverse-style verbs for manipulating 'phyloseq' objects
        at four scales: samples, taxa, occurrences, and tree. Functions
        follow a consistent naming convention and support data masking
        for intuitive filtering, selection, and mutation operations.
        Designed for metabarcoding analyses, it integrates with
        'MiscMetabar' and the 'pqverse' ecosystem.
License: AGPL-3
URL: https://adrientaudiere.github.io/tidypq/,
        https://github.com/adrientaudiere/tidypq
BugReports: https://github.com/adrientaudiere/tidypq/issues
Depends: R (>= 4.1.0), phyloseq, MiscMetabar
Imports: ape, cli, dplyr (>= 1.0.0), ggplot2, lifecycle, patchwork,
        rlang (>= 1.0.0), tibble, tidyr, tidyselect
Suggests: Biostrings, dada2, knitr, pheatmap, rmarkdown, testthat (>=
        3.0.0), vegan
Config/testthat/edition: 3
Encoding: UTF-8
VignetteBuilder: knitr
Roxygen: list(markdown = TRUE)
RdMacros: lifecycle
Config/roxygen2/version: 8.0.0
Config/pak/sysreqs: libglpk-dev make libbz2-dev libicu-dev libjpeg-dev
        liblzma-dev libpng-dev libxml2-dev xz-utils zlib1g-dev
Repository: https://adrientaudiere.r-universe.dev
Date/Publication: 2026-06-22 15:43:39 UTC
RemoteUrl: https://github.com/adrientaudiere/tidypq
RemoteRef: HEAD
RemoteSha: 71930f3e2cb7a9f09a0f7987ac17a60ecde76e6b
NeedsCompilation: no
Packaged: 2026-06-22 19:28:30 UTC; root
Author: Adrien Taudière [aut, cre, cph] (ORCID:
    <https://orcid.org/0000-0003-1088-1182>)
Maintainer: Adrien Taudière <adrien.taudiere@zaclys.net>